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Lagos port congestion: how it affects your shipments and 5 ways to cope

Why Lagos's Apapa and Tin Can ports are chronically congested, how the 2025 clearance system changeover affected shipments, and what shippers and consignees can do to prepare.

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Short answer

Lagos port congestion comes from growing cargo volumes, limited port roads and yard capacity, a backlog of empty containers, and system failures during the clearance system changeover. To cope: prepare documents early, consider ports such as Lekki, leave a time buffer, confirm the free container period, and choose a clearing party with container pickup capacity on the ground.

Information updated: 2026-10-03

Where the congestion comes from

  • Growing imports: Nigeria's imports from China reached a record high in 2025.
  • Port roads and yards: trucks queuing in and out of the port is a long-standing problem.
  • Empty container backlog: lines prioritise unloading full import containers, and slow repositioning of empties takes up yard space.
  • System changeover: while customs rolled out the B'Odogwu clearance system, reports said system failures affected payments, documents and release, leaving large numbers of containers stuck.

5 ways to cope

  1. Finish document preparation before arrival and file as early as possible to cut time in port.
  2. Consider Lekki Deep Sea Port: it can berth larger ships and some routes are less congested, but confirm the inland transport cost.
  3. Build a buffer into transit times: allow an extra one to two weeks in peak season and during policy changes.
  4. Confirm the free container period when booking, and request an extension if needed.
  5. Choose a clearing party with its own team and container pickup resources in Lagos, who can deal with exceptions on site.

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